CDS

Accession Number TCMCG057C08409
gbkey CDS
Protein Id XP_018470200.1
Location join(34298704..34298705,34298793..34298900,34299013..34299127,34299212..34299879,34299968..34300099,34300241..34300330,34300423..34300540,34300613..34300933,34301027..34301091,34301163..34301316,34301476..34301580,34301675..34301944,34302020..34302154,34302250..34302357)
Gene LOC108841916
GeneID 108841916
Organism Raphanus sativus

Protein

Length 796aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018614698.1
Definition PREDICTED: multiple RNA-binding domain-containing protein 1-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category A
Description Contains the following InterPro domains RNA recognition motif, RNP-1 (InterPro IPR000504), Nucleotide-binding, alpha-beta plait (InterPro IPR012677)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14787        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000028        [VIEW IN EMBL-EBI]
GO:0000447        [VIEW IN EMBL-EBI]
GO:0000460        [VIEW IN EMBL-EBI]
GO:0000462        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0000469        [VIEW IN EMBL-EBI]
GO:0000472        [VIEW IN EMBL-EBI]
GO:0000478        [VIEW IN EMBL-EBI]
GO:0000479        [VIEW IN EMBL-EBI]
GO:0000480        [VIEW IN EMBL-EBI]
GO:0000966        [VIEW IN EMBL-EBI]
GO:0000967        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034462        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034471        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042134        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042255        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGAGGATCTGTGTGAAGAATCTGCCTAAAGAAGTGGCAGAGGCTCGTCTTCGAGATGTTTTCTCAAAGAAAGGAGAAATCACTGATGCTAAGTTATTGCGCTCCAGCGAAGGTAAAAGTAGACAAATGGCCTTTATTGGATTCCGTAGCGAACAAGAAGCTCAAGAAGCTATTAAGTACTTCCACAACTCTTACCTTGATACTTTCCGTATCTCTGTTGAGATTGCTCGTAAAGTCGGAGACGACAACGCTCCCCGTCCCTGGAGTCGTCATTCACTCAAGAAACAAGAAAACAGTGGAAAGTCTTCAAACGGAGGAGGCTTAAACAAAAAGGAACAAGAGGTTGATGATGATCCTATGCGCCAGGAGTTTCTTGACGTTATGCTCAGGGGTAAGTCCAAGATTTGGTCCAACGACACGTCGGTTGCTCCATCCGTTAAAGTCTCTAAGAAAGAGAAGGTCTTGGTGAAGAAAGCGGACGAGCCTGTTGTTGTTTCCGAGGCTGCTAAGAGGTCATCAGATACTGAAAAGAGTAAAAAGAAGAAGGTTGTTGCTCCCACTGATGATGTTGATGATTTGGAGTACTTCAAGAGTAGGGTTAAGAAAAACCTGTCGGATTCGGACAGTGATAGTGAAACTGGTAGTGATGAAGATGAAGATGAAGCTGATGATGATGATGATGGTGAAGCTGACGCAGACGGCGATGATGGTGACACTCGTATCTTTCCCCTTGATGGCGATGATGATGAAGCTGGGGGAGCTGAGAATGATGGCGATGATGATGCCATGGAGGTAGAAGATGGCAAGATGGCTCAAGATTCAAAAGTTGACAGTGATGATGTTCTCCAGACTGGTCGCCTTTTCGTCCGGAACCTCCCTTACACTGCAACGGAAGAAGATCTTATGGAACATTTTAGCCCATTCGGTGAGATATCGGAGGTCCATCTTGTTGTTGACAGGGAGACAAAAAGGTCCAAAGGAGTTGCCTACATCCTCTACCAGGTTCCCGAACATGCAGCAAGGGCAATGGAGGTATTAGATAACGATTTTTTCCAGGGGCGGTTGCTGCATGTTTTGCCGTCCAAGCCTCGTATAACGTCTGATAAACAAGCGGATGACACTTCTAATCTGGCTAAAACATTCAAGCAAAAGAAGGAGGAACAAAGAAAGGCGTCTGAAGCCGGTGGAAACACAAAGGCTTGGAATAGTTTGTTCATGCGACAGGACACTATTCTAGATAACACAGTCAGGATGTATGGCGTAAGCAAGAGCGAGCTACTTGACCGTGAATCTGATGATCCTGCTGTACGCTTAGCTCTGGCGGAAACGAAAGTGATTGCGGAGACCAAAGAATCCCTTGCTAAGGCTGGAGTAAATGTAGCTTCCTTGGAAGCGTTCGCTGCAGGGAAAGGCGACGAGAAGAACCGAAGCAAACATATCCTCTTGGTTAAGAACTTACCATTTGCTTCCACTGAAAAGGAACTGACACAAATGTTTGGAAAATTTGGAATAGAGAAAATTATTCTCCCTCCAACGAAGACGATGGCCTTGGTTGTTTTCCTTGAACCGGCTGATGCACGTTCAGCTATTAAGAAGATGGCATACAAGCGTTACAAAGATGCTCCCCTGTATCTGGAGTGGGCTCCCGCAGATATCCTTGAGCCGAAAGCACTTCCCGAGAAGAATGAAGAGAAGAGCGTTACTGGAGGAAATGATGTGAGAAGAGTCAACTTGGAACAGGAGGTTAACCTCGATCCTGACGTAACTGAGTCAAATGTCCTTCATGTTACTAATCTGAGCTTCAAGACGACGGATGAGGGTTTGAAGACGCATTTGGAAGCCCTGGTGAAACATGGAAAGATTCTGAGTGTGAAGATAATGAAGCATGTAAAGAAAGGGAAGAATGTTTCAAGCGGTTATGGTTTTCTCGAATTCGACTCTGTAGAGACAGCGACCAGTGTCTGTAGAGATCTTCAGGGAACTTCTGTGGATGGGCATGCTTTGAAGTTGAGGTTTACAGAACACAAGCGGAGGGACACGGTTGCGAAAGGCTCAGAAAAAATTTCAACGAAGCTAAATGTGAAAAATGTACCTTTTGAGGCAACCGAGAAGGAACTAAGACAGCTTTTCAGTCCATTTGGACAGATCAAGGGCCTCAGGTATCCAAAGAGGAATTTTGGACAGCACGCAGGTTTTGCTTTCGTTGAATACATGACAAAGCAAGAAGCTTCAAACGCTAGGAAAGCATTGGCCAGTACACATTTGTACGGACGTCATTTGGTGACCGAATTTGCCAAAGATGACAATAGCATGGAAGAGAAGAGGCGTCGTTCTGCTGCTAAGTATGAGGAAAACGAAACTCCAAAGAGAAGGAAAACAGCTGAATAG
Protein:  
MSRICVKNLPKEVAEARLRDVFSKKGEITDAKLLRSSEGKSRQMAFIGFRSEQEAQEAIKYFHNSYLDTFRISVEIARKVGDDNAPRPWSRHSLKKQENSGKSSNGGGLNKKEQEVDDDPMRQEFLDVMLRGKSKIWSNDTSVAPSVKVSKKEKVLVKKADEPVVVSEAAKRSSDTEKSKKKKVVAPTDDVDDLEYFKSRVKKNLSDSDSDSETGSDEDEDEADDDDDGEADADGDDGDTRIFPLDGDDDEAGGAENDGDDDAMEVEDGKMAQDSKVDSDDVLQTGRLFVRNLPYTATEEDLMEHFSPFGEISEVHLVVDRETKRSKGVAYILYQVPEHAARAMEVLDNDFFQGRLLHVLPSKPRITSDKQADDTSNLAKTFKQKKEEQRKASEAGGNTKAWNSLFMRQDTILDNTVRMYGVSKSELLDRESDDPAVRLALAETKVIAETKESLAKAGVNVASLEAFAAGKGDEKNRSKHILLVKNLPFASTEKELTQMFGKFGIEKIILPPTKTMALVVFLEPADARSAIKKMAYKRYKDAPLYLEWAPADILEPKALPEKNEEKSVTGGNDVRRVNLEQEVNLDPDVTESNVLHVTNLSFKTTDEGLKTHLEALVKHGKILSVKIMKHVKKGKNVSSGYGFLEFDSVETATSVCRDLQGTSVDGHALKLRFTEHKRRDTVAKGSEKISTKLNVKNVPFEATEKELRQLFSPFGQIKGLRYPKRNFGQHAGFAFVEYMTKQEASNARKALASTHLYGRHLVTEFAKDDNSMEEKRRRSAAKYEENETPKRRKTAE